Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113157279Chemokine (C-X-C motif) ligand 19. (107 aa)    
Predicted Functional Partners:
LOC113150279
SCY domain-containing protein.
    
 0.955
LOC113161333
Interleukin-8; Belongs to the intercrine alpha (chemokine CxC) family.
    
 0.950
ENSATEP00000003705
SCY domain-containing protein.
   
 0.905
ENSATEP00000003761
C-X-C motif chemokine.
   
 0.905
LOC113172750
Chemokine (C-X-C motif) receptor 2; Belongs to the G-protein coupled receptor 1 family.
  
  
  0.893
jun
BZIP domain-containing protein; Belongs to the bZIP family.
    
 0.884
ENSATEP00000026005
Jun proto-oncogene, AP-1 transcription factor subunit; Belongs to the bZIP family.
    
 0.884
LOC113172714
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
     
  0.871
ENSATEP00000026576
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 1.
    
  0.871
REL
REL proto-oncogene, NF-kB subunit.
    
  0.853
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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