Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113165400Si:ch1073-390k14.1. (837 aa)    
Predicted Functional Partners:
ENSATEP00000016566
Neuronal PAS domain protein 2.
    
 0.950
nr1d1
Nuclear receptor subfamily 1, group d, member 1.
     
 0.941
LOC113157851
Period circadian clock 1b.
   
 0.930
CLOCK
Clock circadian regulator a.
    
 0.918
LOC113161432
Clock circadian regulator b.
    
 0.918
timeless
Timeless circadian clock.
    
 0.916
ENSATEP00000008291
Uncharacterized protein.
   
 0.910
LOC113165790
Aryl hydrocarbon receptor nuclear translocator-like 1a.
   
 0.910
ARNTL2
Aryl hydrocarbon receptor nuclear translocator like 2.
   
 0.907
LOC113165936
Aryl hydrocarbon receptor nuclear translocator-like 2.
   
 0.907
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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