Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
sox17SRY-box transcription factor 17. (399 aa)    
Predicted Functional Partners:
ctnnb1
Catenin (cadherin-associated protein), beta 1.
    
 0.921
ENSATEP00000003947
SRY-box transcription factor 32.
   
 
 0.904
lef1
Lymphoid enhancer-binding factor 1.
    
 0.900
LOC113148425
POU domain protein.
    
 0.898
tcf7l2
Transcription factor 7 like 2.
    
 0.892
LOC113158638
HMG box domain-containing protein.
    
 0.891
ENSATEP00000017990
Transcription factor 7.
    
 0.891
LOC113150777
Transcription factor 7 like 1b.
    
 0.891
ENSATEP00000015173
Mix paired-like homeobox.
    
 0.870
ENSATEP00000014242
T-box transcription factor Ta.
    
 0.804
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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