Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
LOC113161913Low density lipoprotein receptor b. (873 aa)    
Predicted Functional Partners:
RELN
Reelin.
    
 0.973
pcsk9
Proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
    
 0.967
mylip
Myosin regulatory light chain interacting protein a.
    
 0.961
ldlrap1
Low density lipoprotein receptor adaptor protein 1b.
    
 0.954
dab2
DAB adaptor protein 2.
    
 0.925
LOC113153133
Low density lipoprotein receptor adaptor protein 1a.
    
 0.924
ENSATEP00000008046
Apolipoprotein Ea.
    
 0.921
lrpap1
Low density lipoprotein receptor-related protein associated protein 1.
    
 0.914
ENSATEP00000002943
DAB adaptor protein 1b.
    
 0.910
ENSATEP00000024127
DAB adaptor protein 1a.
    
 0.910
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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