Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC113174404Myocardial zonula adherens protein. (662 aa)    
Predicted Functional Partners:
polr2c
Polymerase (RNA) II (DNA directed) polypeptide C.
    
  0.873
polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
  0.872
polr2k
Polymerase (RNA) II (DNA directed) polypeptide K.
   
 
  0.870
polr2g
Polymerase (RNA) II (DNA directed) polypeptide G-like.
     
  0.870
polr2d
Polymerase (RNA) II (DNA directed) polypeptide D.
   
 
  0.870
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
  0.699
LOC113156292
NBR1 autophagy cargo receptor a.
     
  0.684
LOC113158062
NBR1 autophagy cargo receptor b.
     
  0.684
smim20
Small integral membrane protein 20.
   
 0.654
gatd1
Glutamine amidotransferase like class 1 domain containing 1.
   
 0.654
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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