nxph2 protein (Anabas testudineus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

nxph2

Neurexophilin; May be signaling molecules that resemble neuropeptides. (263 aa)

Predicted Functional Partners:

ENSATEP00000003088

0.604

ENSATEP00000019560

0.604

ENSATEP00000025267

0.604

nrxn1

0.604

ENSATEP00000028940

0.604

NRXN2

0.604

ENSATEP00000030717

0.604

ENSATEP00000001798

0.537

ENSATEP00000033366

0.536

ENSATEP00000033755

0.525

Your Current Organism:

Anabas testudineus

NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSATEP00000001798	ENSATEP00000033366	ENSATEP00000001798	ENSATEP00000033366	Bone morphogenetic protein/retinoic acid inducible neural-specific 3a, tandem duplicate 1.	TAFA chemokine like family member 3.	0.417
ENSATEP00000001798	nxph2	ENSATEP00000001798	ENSATEP00000004358	Bone morphogenetic protein/retinoic acid inducible neural-specific 3a, tandem duplicate 1.	Neurexophilin; May be signaling molecules that resemble neuropeptides.	0.537
ENSATEP00000003088	ENSATEP00000019560	ENSATEP00000003088	ENSATEP00000019560	Uncharacterized protein.	Uncharacterized protein.	0.835
ENSATEP00000003088	ENSATEP00000025267	ENSATEP00000003088	ENSATEP00000025267	Uncharacterized protein.	Neurexin 3b.	0.835
ENSATEP00000003088	ENSATEP00000028940	ENSATEP00000003088	ENSATEP00000028940	Uncharacterized protein.	Uncharacterized protein.	0.698
ENSATEP00000003088	ENSATEP00000030717	ENSATEP00000003088	ENSATEP00000030717	Uncharacterized protein.	Syndecan domain-containing protein.	0.698
ENSATEP00000003088	NRXN2	ENSATEP00000003088	ENSATEP00000029062	Uncharacterized protein.	Neurexin 2.	0.698
ENSATEP00000003088	nxph2	ENSATEP00000003088	ENSATEP00000004358	Uncharacterized protein.	Neurexophilin; May be signaling molecules that resemble neuropeptides.	0.604
ENSATEP00000019560	ENSATEP00000003088	ENSATEP00000019560	ENSATEP00000003088	Uncharacterized protein.	Uncharacterized protein.	0.835
ENSATEP00000019560	nrxn1	ENSATEP00000019560	ENSATEP00000028439	Uncharacterized protein.	Uncharacterized protein.	0.835
ENSATEP00000019560	nxph2	ENSATEP00000019560	ENSATEP00000004358	Uncharacterized protein.	Neurexophilin; May be signaling molecules that resemble neuropeptides.	0.604
ENSATEP00000025267	ENSATEP00000003088	ENSATEP00000025267	ENSATEP00000003088	Neurexin 3b.	Uncharacterized protein.	0.835
ENSATEP00000025267	nrxn1	ENSATEP00000025267	ENSATEP00000028439	Neurexin 3b.	Uncharacterized protein.	0.835
ENSATEP00000025267	nxph2	ENSATEP00000025267	ENSATEP00000004358	Neurexin 3b.	Neurexophilin; May be signaling molecules that resemble neuropeptides.	0.604
ENSATEP00000028940	ENSATEP00000003088	ENSATEP00000028940	ENSATEP00000003088	Uncharacterized protein.	Uncharacterized protein.	0.698
ENSATEP00000028940	nrxn1	ENSATEP00000028940	ENSATEP00000028439	Uncharacterized protein.	Uncharacterized protein.	0.698
ENSATEP00000028940	nxph2	ENSATEP00000028940	ENSATEP00000004358	Uncharacterized protein.	Neurexophilin; May be signaling molecules that resemble neuropeptides.	0.604
ENSATEP00000030717	ENSATEP00000003088	ENSATEP00000030717	ENSATEP00000003088	Syndecan domain-containing protein.	Uncharacterized protein.	0.698
ENSATEP00000030717	nrxn1	ENSATEP00000030717	ENSATEP00000028439	Syndecan domain-containing protein.	Uncharacterized protein.	0.698
ENSATEP00000030717	nxph2	ENSATEP00000030717	ENSATEP00000004358	Syndecan domain-containing protein.	Neurexophilin; May be signaling molecules that resemble neuropeptides.	0.604