Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113162299Activating transcription factor 4a. (454 aa)    
Predicted Functional Partners:
ddit3
DNA-damage-inducible transcript 3.
   
 0.994
atf3
Activating transcription factor 3.
    
 0.990
LOC113154128
Tribbles pseudokinase 3.
   
 0.988
LOC113155852
E1A binding protein p300 a.
    
 0.987
ENSATEP00000010634
E1A binding protein p300 b.
    
 0.987
LOC113161300
CREB binding protein a.
    
 0.986
LOC113168288
CREB binding protein b.
    
 0.986
ENSATEP00000020766
CCAAT enhancer binding protein gamma.
   
 0.984
eif2s1
Eukaryotic translation initiation factor 2, subunit 1 alpha b.
    
 0.980
atf6
Activating transcription factor 6.
     
 0.978
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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