Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC113154413Coiled-coil-helix-coiled-coil-helix domain containing 4b. (158 aa)    
Predicted Functional Partners:
gfer
Sulfhydryl oxidase.
    
 0.965
timm10
Translocase of inner mitochondrial membrane 10 homolog (yeast).
   
 0.943
LOC113172779
Cytochrome c oxidase copper chaperone COX17.
   
 0.938
timm13
Translocase of inner mitochondrial membrane 13 homolog (yeast); Belongs to the small Tim family.
   
 0.929
timm9
Translocase of inner mitochondrial membrane 9 homolog.
   
 0.925
aifm1
Apoptosis inducing factor mitochondrion associated 1.
    
 
 0.893
ndufs5
NADH:ubiquinone oxidoreductase subunit S5.
    
 
 0.855
vps35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.807
vps29
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.807
timm8a
Translocase of inner mitochondrial membrane 8 homolog A (yeast); Belongs to the small Tim family.
   
 0.800
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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