Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSATEP00000004524Si:ch73-29c22.1. (275 aa)    
Predicted Functional Partners:
LOC113173676
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.950
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.950
sqstm1
Sequestosome 1.
    
 0.879
klhl26
Kelch-like family member 26.
    
  0.859
NFE2L1
Nuclear factor, erythroid 2 like 1.
    
 0.853
LOC113153200
Nuclear factor, erythroid 2-like 1a.
    
 0.853
nfe2l2
Nuclear factor, erythroid 2-like 2a.
    
 0.853
LOC113148302
Coronin; Belongs to the WD repeat coronin family.
    
 
 0.847
rbx1
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.840
LOC113148302-2
Presequence translocase associated motor 16.
    
 
 0.821
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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