Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSATEP00000004786SMC5-SMC6 complex localization factor 1. (846 aa)    
Predicted Functional Partners:
rad18
RAD18 E3 ubiquitin protein ligase.
   
 
 0.991
ENSATEP00000009787
Uncharacterized protein.
    
 0.973
bard1
BRCA1 associated RING domain 1.
   
 0.964
nbn
Nibrin.
    
 0.961
ENSATEP00000015059
RAD17 checkpoint clamp loader component.
  
 0.956
ENSATEP00000003156
Non-specific serine/threonine protein kinase.
   
 0.955
rad1
RAD1 homolog (S. pombe).
    
 0.955
smc5
AAA_23 domain-containing protein.
  
 
 0.949
cdc45
CDC45 cell division cycle 45 homolog (S. cerevisiae).
   
 
 0.948
LOC113158860
CAP-ZIP_m domain-containing protein.
    
 
 0.945
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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