Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSATEP00000004862Collagen, type XXVII, alpha 1b. (1277 aa)    
Predicted Functional Partners:
ENSATEP00000027005
Collagen, type I, alpha 2.
  
  
0.864
ENSATEP00000003728
Procollagen, type IX, alpha 2.
  
  
0.853
ENSATEP00000023288
Collagen, type IX, alpha 3.
  
  
0.844
ENSATEP00000016436
Uncharacterized protein.
     
 0.823
ENSATEP00000029958
Fibrillar collagen NC1 domain-containing protein.
     
  0.822
ENSATEP00000022257
Collagen, type V, alpha 2b.
  
  
0.780
ENSATEP00000007875
Uncharacterized protein.
  
  
0.774
ENSATEP00000017062
Uncharacterized protein.
  
  
0.772
ENSATEP00000013806
Fibrillar collagen NC1 domain-containing protein.
     
 0.746
ENSATEP00000016396
Procollagen, type V, alpha 1.
  
  
0.641
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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