Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rabl3RAB, member of RAS oncogene family-like 3. (233 aa)    
Predicted Functional Partners:
rabggta
Rab geranylgeranyltransferase subunit alpha.
    
 
 0.824
LOC113173221
G protein-coupled receptor 89B.
    
 
 0.823
ENSATEP00000029849
NDK domain-containing protein.
  
 0.779
gtf2e1
General transcription factor IIE, polypeptide 1, alpha.
   
 
 0.776
hspa9
Heat shock protein 9; Belongs to the heat shock protein 70 family.
  
 0.759
rab24
RAB24, member RAS oncogene family.
      
 0.718
ENSATEP00000033389
RAB3 GTPase activating protein subunit 1.
      
 0.706
LOC113168181
RAB guanine nucleotide exchange factor (GEF) 1, like.
    
 
 0.699
rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
    
 
 0.699
LOC113160737
Heat shock protein 4b.
  
 0.685
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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