LOC113158994 protein (Anabas testudineus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC113158994

Pyrophosphatase (inorganic) 1b. (291 aa)

Predicted Functional Partners:

atp5po

0.943

atp5f1c

0.935

lhpp

0.916

atp5f1a

0.907

atp6v1d

0.907

ATP5F1A

0.907

atp6v0b

0.900

LOC113162549

0.900

LOC113173924

0.900

atp5mc3

0.900

Your Current Organism:

Anabas testudineus

NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ATP5F1A	LOC113158994	ENSATEP00000026446	ENSATEP00000004995	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Pyrophosphatase (inorganic) 1b.	0.907
ATP5F1A	LOC113162549	ENSATEP00000026446	ENSATEP00000013917	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase membrane subunit c locus 1; Belongs to the ATPase C chain family.	0.987
ATP5F1A	LOC113173924	ENSATEP00000026446	ENSATEP00000017419	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.	0.987
ATP5F1A	atp5f1c	ENSATEP00000026446	ENSATEP00000031957	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit gamma.	0.999
ATP5F1A	atp5mc3	ENSATEP00000026446	ENSATEP00000022216	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.	0.987
ATP5F1A	atp5po	ENSATEP00000026446	ENSATEP00000008986	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase peripheral stalk subunit OSCP.	0.999
ATP5F1A	atp6v0b	ENSATEP00000026446	ENSATEP00000003695	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATPase H+ transporting V0 subunit b; Belongs to the V-ATPase proteolipid subunit family.	0.940
ATP5F1A	atp6v1d	ENSATEP00000026446	ENSATEP00000025088	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATPase H+ transporting V1 subunit D.	0.778
ATP5F1A	lhpp	ENSATEP00000026446	ENSATEP00000001397	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Phospholysine phosphohistidine inorganic pyrophosphate phosphatase.	0.882
LOC113158994	ATP5F1A	ENSATEP00000004995	ENSATEP00000026446	Pyrophosphatase (inorganic) 1b.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.907
LOC113158994	LOC113162549	ENSATEP00000004995	ENSATEP00000013917	Pyrophosphatase (inorganic) 1b.	ATP synthase membrane subunit c locus 1; Belongs to the ATPase C chain family.	0.900
LOC113158994	LOC113173924	ENSATEP00000004995	ENSATEP00000017419	Pyrophosphatase (inorganic) 1b.	ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.	0.900
LOC113158994	atp5f1a	ENSATEP00000004995	ENSATEP00000020196	Pyrophosphatase (inorganic) 1b.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.907
LOC113158994	atp5f1c	ENSATEP00000004995	ENSATEP00000031957	Pyrophosphatase (inorganic) 1b.	ATP synthase subunit gamma.	0.935
LOC113158994	atp5mc3	ENSATEP00000004995	ENSATEP00000022216	Pyrophosphatase (inorganic) 1b.	ATP-synt_C domain-containing protein; Belongs to the ATPase C chain family.	0.900
LOC113158994	atp5po	ENSATEP00000004995	ENSATEP00000008986	Pyrophosphatase (inorganic) 1b.	ATP synthase peripheral stalk subunit OSCP.	0.943
LOC113158994	atp6v0b	ENSATEP00000004995	ENSATEP00000003695	Pyrophosphatase (inorganic) 1b.	ATPase H+ transporting V0 subunit b; Belongs to the V-ATPase proteolipid subunit family.	0.900
LOC113158994	atp6v1d	ENSATEP00000004995	ENSATEP00000025088	Pyrophosphatase (inorganic) 1b.	ATPase H+ transporting V1 subunit D.	0.907
LOC113158994	lhpp	ENSATEP00000004995	ENSATEP00000001397	Pyrophosphatase (inorganic) 1b.	Phospholysine phosphohistidine inorganic pyrophosphate phosphatase.	0.916
LOC113162549	ATP5F1A	ENSATEP00000013917	ENSATEP00000026446	ATP synthase membrane subunit c locus 1; Belongs to the ATPase C chain family.	ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.987