Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSATEP00000005034DWNN domain-containing protein. (123 aa)    
Predicted Functional Partners:
pcf11
PCF11 cleavage and polyadenylation factor subunit.
   
 0.985
WDR33
WD repeat domain 33.
   
 0.979
cpsf4
Cleavage and polyadenylation specific factor 4.
    
 0.962
cpsf1
Cleavage and polyadenylation specific factor 1.
    
 0.962
ENSATEP00000025458
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.962
LOC113162522
FIP1 like 1b (S. cerevisiae).
    
 0.954
papolg
Poly(A) polymerase gamma.
   
 0.949
cstf3
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
    
 0.948
sympk
Symplekin.
    
 0.945
fndc10
Uncharacterized protein.
    
 0.933
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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