Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSATEP00000005167Diencephalon/mesencephalon homeobox 1b. (352 aa)    
Predicted Functional Partners:
ENSATEP00000029849
NDK domain-containing protein.
    
   0.640
LOC113164616
BHLH domain-containing protein.
   
 0.545
sik3
SIK family kinase 3.
    
 
 0.533
wdr90
WD repeat domain 90.
    
   0.515
ENSATEP00000010434
LIM homeobox 4.
   
  0.514
LHX3
LIM homeobox 3.
   
  0.514
srf
Serum response factor b.
    
 0.512
LOC113162031
MADS-box domain-containing protein.
    
 0.512
LOC113159194
LIM domain binding 1a.
    
 0.482
ldb2
LIM domain binding 2a.
    
 0.482
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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