Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
clec16aC-type lectin domain containing 16A. (1129 aa)    
Predicted Functional Partners:
rnf41
Ring finger protein 41.
    
 
 0.902
dexi
Dexi homolog (mouse).
      
 0.735
LOC113170053
Uncharacterized protein.
    
 
 0.727
vps26b
VPS26, retromer complex component B.
    
 
 0.727
RAB39B
RAB39B, member RAS oncogene family.
    
   0.726
usp8
Ubiquitin specific peptidase 8; Belongs to the peptidase C19 family.
      
 0.680
LOC113159399
Rab-GAP TBC domain-containing protein.
      
 0.657
tbc1d14
TBC1 domain family, member 14.
      
 0.657
ENSATEP00000002457
RNA binding motif protein 28.
      
 0.656
wdr44
WD repeat domain 44.
      
 0.656
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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