ciita protein (Anabas testudineus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

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textmining

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experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

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[Homology]

Score

ciita

NACHT domain-containing protein. (1625 aa)

Predicted Functional Partners:

rfx5

0.999

rfxank

0.994

rfxap

0.970

nfyc

0.928

nfya

0.928

nfyb

0.928

ENSATEP00000030148

0.908

LOC113153896

0.897

stat3

0.897

stat4

0.897

Your Current Organism:

Anabas testudineus

NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSATEP00000030148	ciita	ENSATEP00000030148	ENSATEP00000005255	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.	NACHT domain-containing protein.	0.908
LOC113153896	ciita	ENSATEP00000002259	ENSATEP00000005255	Signal transducer and activator of transcription.	NACHT domain-containing protein.	0.897
ciita	ENSATEP00000030148	ENSATEP00000005255	ENSATEP00000030148	NACHT domain-containing protein.	Proteasome 26S subunit, ATPase 5; Belongs to the AAA ATPase family.	0.908
ciita	LOC113153896	ENSATEP00000005255	ENSATEP00000002259	NACHT domain-containing protein.	Signal transducer and activator of transcription.	0.897
ciita	nfya	ENSATEP00000005255	ENSATEP00000027668	NACHT domain-containing protein.	Nuclear transcription factor Y, alpha, like.	0.928
ciita	nfyb	ENSATEP00000005255	ENSATEP00000034400	NACHT domain-containing protein.	Nuclear transcription factor Y, beta a.	0.928
ciita	nfyc	ENSATEP00000005255	ENSATEP00000021781	NACHT domain-containing protein.	Nuclear transcription factor Y, gamma.	0.928
ciita	rfx5	ENSATEP00000005255	ENSATEP00000017334	NACHT domain-containing protein.	Regulatory factor X, 5.	0.999
ciita	rfxank	ENSATEP00000005255	ENSATEP00000034800	NACHT domain-containing protein.	Regulatory factor X-associated ankyrin-containing protein.	0.994
ciita	rfxap	ENSATEP00000005255	ENSATEP00000004408	NACHT domain-containing protein.	Regulatory factor X-associated protein.	0.970
ciita	stat3	ENSATEP00000005255	ENSATEP00000003147	NACHT domain-containing protein.	Signal transducer and activator of transcription.	0.897
ciita	stat4	ENSATEP00000005255	ENSATEP00000012589	NACHT domain-containing protein.	Signal transducer and activator of transcription.	0.897
nfya	ciita	ENSATEP00000027668	ENSATEP00000005255	Nuclear transcription factor Y, alpha, like.	NACHT domain-containing protein.	0.928
nfya	nfyb	ENSATEP00000027668	ENSATEP00000034400	Nuclear transcription factor Y, alpha, like.	Nuclear transcription factor Y, beta a.	0.999
nfya	nfyc	ENSATEP00000027668	ENSATEP00000021781	Nuclear transcription factor Y, alpha, like.	Nuclear transcription factor Y, gamma.	0.999
nfya	rfx5	ENSATEP00000027668	ENSATEP00000017334	Nuclear transcription factor Y, alpha, like.	Regulatory factor X, 5.	0.670
nfya	rfxank	ENSATEP00000027668	ENSATEP00000034800	Nuclear transcription factor Y, alpha, like.	Regulatory factor X-associated ankyrin-containing protein.	0.509
nfya	rfxap	ENSATEP00000027668	ENSATEP00000004408	Nuclear transcription factor Y, alpha, like.	Regulatory factor X-associated protein.	0.468
nfyb	ciita	ENSATEP00000034400	ENSATEP00000005255	Nuclear transcription factor Y, beta a.	NACHT domain-containing protein.	0.928
nfyb	nfya	ENSATEP00000034400	ENSATEP00000027668	Nuclear transcription factor Y, beta a.	Nuclear transcription factor Y, alpha, like.	0.999