Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113169475Uncharacterized protein. (1201 aa)    
Predicted Functional Partners:
tbcb
Tubulin folding cofactor B.
    
   0.718
LOC113167989
Uncharacterized protein.
   
 0.694
LOC113154257
Uncharacterized protein.
   
 0.694
RHOB
Ras homolog family member B.
   
 0.694
LOC113167010
Uncharacterized protein.
   
 0.694
LOC113167459
Uncharacterized protein.
   
 0.694
LOC113167461
Uncharacterized protein.
   
 0.694
LOC113155463
Ras homolog family member Ca.
   
 0.694
rnd3
Rho family GTPase 3a.
   
 0.693
RND1
Rho family GTPase 1.
   
 0.693
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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