Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
Experiments
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[Homology]
Score
LOC113149164Actin alpha 1, skeletal muscle. (377 aa)    
Predicted Functional Partners:
arpc2
Arp2/3 complex 34 kDa subunit; Functions as actin-binding component of the Arp2/3 complex which is involved in regulation of actin polymerization and together with an activating nucleation-promoting factor (NPF) mediates the formation of branched actin networks.
   
 0.911
LOC113167572
Zgc:153867.
   
 0.901
ENSATEP00000014868
Uncharacterized protein.
   
 0.888
ENSATEP00000033539
Troponin T2c, cardiac.
   
 0.888
actl6a
Actin-like 6A; Belongs to the actin family.
   
 0.881
LOC113171342
Myosin, light chain 13.
   
 0.877
LOC113148202
Cofilin 2 (muscle); Belongs to the actin-binding proteins ADF family.
   
 0.877
cfl1
Cofilin 1; Belongs to the actin-binding proteins ADF family.
   
 0.877
MYL4
Myosin light chain 4.
   
 0.877
LOC113161678
Myosin, heavy chain 9a, non-muscle; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.875
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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