Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
timp2TIMP metallopeptidase inhibitor 2a. (220 aa)    
Predicted Functional Partners:
mmp9
Matrix metallopeptidase 9.
   
 0.966
ENSATEP00000010411
Matrix metallopeptidase 14b (membrane-inserted).
    
 0.963
ENSATEP00000011014
Matrix metallopeptidase 15b.
    
 0.954
mmp2
Matrix metallopeptidase 2.
   
 0.896
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 
 0.859
ENSATEP00000034226
Matrix metallopeptidase 13b.
   
 0.788
ENSATEP00000001669
ZnMc domain-containing protein.
   
 0.769
ENSATEP00000002125
ZnMc domain-containing protein.
   
 0.769
ENSATEP00000002875
ZnMc domain-containing protein.
   
 0.769
LOC113169374
Matrix metallopeptidase 1.
   
 0.769
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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