Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RNF223Ring finger protein 223. (185 aa)    
Predicted Functional Partners:
rnf144a
RBR-type E3 ubiquitin transferase.
    
 0.720
ENSATEP00000009226
MYST/Esa1-associated factor 6.
     
 0.699
rnf144b
RBR-type E3 ubiquitin transferase.
    
 0.694
ENSATEP00000023655
Transmembrane protein 129, E3 ubiquitin protein ligase.
      
 0.679
noc2l
NOC2-like nucleolar associated transcriptional repressor.
    
 
 0.643
LOC113154721
Uncharacterized protein.
    
 0.543
ENSATEP00000026353
Si:dkey-98j1.5.
    
 0.543
samd11
Sterile alpha motif domain containing 11.
    
 
 0.531
ENSATEP00000005482
Ring finger protein, transmembrane 2.
      
 0.462
rnft1
Ring finger protein, transmembrane 1.
      
 0.462
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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