Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc49a4Solute carrier family 49 member 4. (464 aa)    
Predicted Functional Partners:
ENSATEP00000035486
Uncharacterized protein.
      
 0.705
fitm2
Fat storage inducing transmembrane protein 2.
      
 0.628
slc25a26
Solute carrier family 25 member 26; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.599
hspbap1
Hspb associated protein 1.
      
 0.531
LOC113154335
Solute carrier family 48 member 1b.
      
 0.507
ENSATEP00000015979
RAB20, member RAS oncogene family.
      
 0.469
vhl
Von Hippel-Lindau tumor suppressor.
      
 0.468
slc37a4
Solute carrier family 37 member 4a.
   
  
 0.466
LOC113171171
Solute carrier family 37 member 4b.
   
  
 0.466
ppp4r2
Protein phosphatase 4, regulatory subunit 2b.
      
 0.443
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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