Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113162073Mical-like 2b. (793 aa)    
Predicted Functional Partners:
LOC113170481
Uncharacterized protein.
    
 0.921
actn3
Actinin alpha 3b.
    
  0.905
ACTN4
Actinin alpha 4.
    
  0.905
LOC113159842
Actinin, alpha 2b.
    
  0.905
LOC113147980
Actinin, alpha 1.
    
  0.905
RAB8A
RAB8A, member RAS oncogene family.
    
 0.898
rab8b
Multiple EGF-like-domains 8.
    
 0.898
ENSATEP00000019484
RHD domain-containing protein.
    
 0.898
ENSATEP00000019831
Uncharacterized protein.
    
 0.898
LOC113171857
RAB8A, member RAS oncogene family.
    
 0.898
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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