Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSATEP00000005867Collagen, type XXVIII, alpha 1b. (1021 aa)    
Predicted Functional Partners:
tac1
Tachykinin 1.
     
  0.824
tacr2
Tachykinin receptor 2; Belongs to the G-protein coupled receptor 1 family.
     
  0.824
LOC113169144
Uncharacterized protein.
     
  0.698
ppib
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
    
 0.546
trim45
Tripartite motif containing 45.
    
 0.541
mysm1
Myb-like, SWIRM and MPN domains 1.
    
  0.529
ENSATEP00000001278
Fras1 related extracellular matrix 1a.
    
 0.517
LOC113152840
Fras1 related extracellular matrix 1b.
    
 0.517
arid4a
AT rich interactive domain 4A (RBP1-like).
    
 0.516
arid4b
Translocase of outer mitochondrial membrane 20.
    
 0.516
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
Server load: low (24%) [HD]