Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lrrc59Leucine rich repeat containing 59. (323 aa)    
Predicted Functional Partners:
ENSATEP00000026784
Staphylococcal nuclease domain-containing protein; Endonuclease that mediates miRNA decay of both protein-free and AGO2-loaded miRNAs.
   
 
 0.963
dhx9
DEAH (Asp-Glu-Ala-His) box helicase 9.
    
  0.802
ybx1
Y box binding protein 1.
    
   0.801
ENSATEP00000013028
Heterogeneous nuclear ribonucleoprotein M.
    
 
 0.796
stau2
Staufen double-stranded RNA binding protein 2.
    
   0.769
stau1
Staufen double-stranded RNA binding protein 1.
    
   0.769
sec61b
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
 
 0.764
sec63
SEC63 homolog, protein translocation regulator.
   
   0.761
ilf3
Interleukin enhancer binding factor 3b.
    
   0.715
ENSATEP00000018382
Interleukin enhancer binding factor 3b.
    
   0.715
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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