STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NKX2-8NK2 homeobox 8. (229 aa)    
Predicted Functional Partners:
ENSATEP00000001983
NK2 homeobox 2b.
   
    0.635
LOC113159285
NK2 homeobox 2a.
   
    0.635
helz
Helicase with zinc finger.
      
 0.535
tbx20
T-box transcription factor 20.
    
 0.504
ENSATEP00000000666
GATA binding protein 5.
    
 0.439
gata6
GATA binding protein 6.
    
 0.439
gata4
GATA binding protein 4.
    
 0.439
tbx15
T-box transcription factor 15.
    
 0.435
GATA2
GATA binding protein 2.
    
 0.435
ENSATEP00000004186
Zinc finger GATA like protein 1.
    
 0.435
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.