LOC113159215 protein (Anabas testudineus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC113159215

Zinc finger and BTB domain containing 42. (531 aa)

Predicted Functional Partners:

fbxl17

0.794

ENSATEP00000018024

0.681

ZNF516

0.681

ENSATEP00000025535

0.650

zbtb3

0.591

hmg20b

0.581

rnf216

0.566

CTBP2

0.559

ctbp1

0.559

LOC113160439

0.559

Your Current Organism:

Anabas testudineus

NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CTBP2	ENSATEP00000018024	ENSATEP00000001573	ENSATEP00000018024	C-terminal binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Uncharacterized protein.	0.740
CTBP2	ENSATEP00000025535	ENSATEP00000001573	ENSATEP00000025535	C-terminal binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	0.425
CTBP2	LOC113159215	ENSATEP00000001573	ENSATEP00000006334	C-terminal binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Zinc finger and BTB domain containing 42.	0.559
CTBP2	LOC113160439	ENSATEP00000001573	ENSATEP00000009403	C-terminal binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.871
CTBP2	ZNF516	ENSATEP00000001573	ENSATEP00000035656	C-terminal binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	Zinc finger protein 516.	0.740
CTBP2	ctbp1	ENSATEP00000001573	ENSATEP00000004824	C-terminal binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.871
ENSATEP00000018024	CTBP2	ENSATEP00000018024	ENSATEP00000001573	Uncharacterized protein.	C-terminal binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.740
ENSATEP00000018024	ENSATEP00000025535	ENSATEP00000018024	ENSATEP00000025535	Uncharacterized protein.	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	0.650
ENSATEP00000018024	LOC113159215	ENSATEP00000018024	ENSATEP00000006334	Uncharacterized protein.	Zinc finger and BTB domain containing 42.	0.681
ENSATEP00000018024	LOC113160439	ENSATEP00000018024	ENSATEP00000009403	Uncharacterized protein.	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.740
ENSATEP00000018024	ctbp1	ENSATEP00000018024	ENSATEP00000004824	Uncharacterized protein.	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.740
ENSATEP00000025535	CTBP2	ENSATEP00000025535	ENSATEP00000001573	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	C-terminal binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.425
ENSATEP00000025535	ENSATEP00000018024	ENSATEP00000025535	ENSATEP00000018024	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	Uncharacterized protein.	0.650
ENSATEP00000025535	LOC113159215	ENSATEP00000025535	ENSATEP00000006334	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	Zinc finger and BTB domain containing 42.	0.650
ENSATEP00000025535	LOC113160439	ENSATEP00000025535	ENSATEP00000009403	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.425
ENSATEP00000025535	ZNF516	ENSATEP00000025535	ENSATEP00000035656	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	Zinc finger protein 516.	0.650
ENSATEP00000025535	ctbp1	ENSATEP00000025535	ENSATEP00000004824	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	C-terminal binding protein 1; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.425
ENSATEP00000025535	zbtb3	ENSATEP00000025535	ENSATEP00000020628	Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.	Zinc finger and BTB domain containing 3.	0.650
LOC113159215	CTBP2	ENSATEP00000006334	ENSATEP00000001573	Zinc finger and BTB domain containing 42.	C-terminal binding protein 2; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.	0.559
LOC113159215	ENSATEP00000018024	ENSATEP00000006334	ENSATEP00000018024	Zinc finger and BTB domain containing 42.	Uncharacterized protein.	0.681