Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113169865Nuclear receptor subfamily 1, group D, member 2a. (600 aa)    
Predicted Functional Partners:
nr1d1
Nuclear receptor subfamily 1, group d, member 1.
   
 0.930
LOC113154026
D site albumin promoter binding protein a.
   
 0.892
ENSATEP00000032694
D site albumin promoter binding protein b.
   
 0.892
med1
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.884
ENSATEP00000016566
Neuronal PAS domain protein 2.
    
 0.876
CLOCK
Clock circadian regulator a.
    
 0.876
LOC113161432
Clock circadian regulator b.
    
 0.876
LOC113154958
Nuclear receptor subfamily 1, group D, member 4b.
   
 0.860
ppard
Peroxisome proliferator-activated receptor delta b.
    
 0.851
LOC113167322
Nuclear receptor subfamily 1, group H, member 5.
   
 0.845
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
Server load: low (28%) [HD]