Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ucmaUpper zone of growth plate and cartilage matrix associated a. (134 aa)    
Predicted Functional Partners:
ggcx
Gamma-glutamyl carboxylase.
      
 0.662
sergef
Secretion regulating guanine nucleotide exchange factor.
      
 0.655
ENSATEP00000017929
Fin bud initiation factor a.
      
 0.655
hace1
HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1.
      
 0.620
LOC113165242
Usher syndrome 1C.
      
 0.615
tmem244
Transmembrane protein 244.
      
 0.595
ENSATEP00000015714
Uncharacterized protein.
      
 0.595
LOC113157299
Regulator of G protein signaling 12a.
      
 0.465
ENSATEP00000032330
Regulator of G protein signaling 12b.
      
 0.465
LOC113174267
Anoctamin.
      
 0.464
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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