Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC113170382RAB5A, member RAS oncogene family, b. (216 aa)    
Predicted Functional Partners:
LOC113168181
RAB guanine nucleotide exchange factor (GEF) 1, like.
   
 0.981
rabgef1
RAB guanine nucleotide exchange factor (GEF) 1.
   
 0.981
ENSATEP00000003292
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.973
eea1
Early endosome antigen 1.
    
 0.966
vps18
VPS18 core subunit of CORVET and HOPS complexes.
    
 0.961
vps16
Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family.
    
 0.959
ENSATEP00000023194
Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family.
    
 0.951
ENSATEP00000032988
VPS33A core subunit of CORVET and HOPS complexes; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.937
LOC113148685
Si:ch211-266g18.9.
    
 0.936
tgfbrap1
Transforming growth factor, beta receptor associated protein 1.
    
 0.936
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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