Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cuedc1CUE domain containing 1b. (393 aa)    
Predicted Functional Partners:
arrdc3
Arrestin domain containing 3a.
    
   0.844
tom1
Target of myb1 membrane trafficking protein.
    
   0.798
LOC113156258
Target of myb1 like 2 membrane trafficking protein.
    
   0.798
LOC113162316
Uncharacterized protein; Belongs to the TOM1 family.
    
   0.798
TOM1L2
Target of myb1 like 2 membrane trafficking protein; Belongs to the TOM1 family.
    
   0.798
ENSATEP00000034444
Uncharacterized protein.
    
   0.738
LOC113166995
E3 ubiquitin-protein ligase.
    
   0.736
itch
E3 ubiquitin-protein ligase.
    
   0.736
cuedc2
CUE domain containing 2.
      
 0.706
arrdc1
Arrestin domain containing 1b.
    
   0.705
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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