ppid protein (Anabas testudineus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

ppid

Peptidylprolyl isomerase D. (370 aa)

Predicted Functional Partners:

ptges3

0.972

LOC113168027

0.972

ENSATEP00000001232

0.966

ENSATEP00000001245

0.966

hsp90ab1

0.966

stip1

0.953

ENSATEP00000012002

0.949

LOC113148625

0.949

vdac1

0.922

LOC113159920

0.920

Your Current Organism:

Anabas testudineus

NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSATEP00000001232	ENSATEP00000012002	ENSATEP00000001232	ENSATEP00000012002	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	Aha1_N domain-containing protein.	0.906
ENSATEP00000001232	LOC113148625	ENSATEP00000001232	ENSATEP00000025670	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	AHA1, activator of heat shock protein ATPase homolog 1b.	0.906
ENSATEP00000001232	LOC113159920	ENSATEP00000001232	ENSATEP00000000491	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.625
ENSATEP00000001232	LOC113168027	ENSATEP00000001232	ENSATEP00000030598	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	Prostaglandin E synthase 3a (cytosolic).	0.959
ENSATEP00000001232	hsp90ab1	ENSATEP00000001232	ENSATEP00000024904	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	Heat shock protein 90, alpha (cytosolic), class B member 1.	0.871
ENSATEP00000001232	ppid	ENSATEP00000001232	ENSATEP00000006871	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	Peptidylprolyl isomerase D.	0.966
ENSATEP00000001232	ptges3	ENSATEP00000001232	ENSATEP00000024030	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	Prostaglandin E synthase 3b (cytosolic).	0.959
ENSATEP00000001232	stip1	ENSATEP00000001232	ENSATEP00000011139	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	Stress-induced phosphoprotein 1.	0.989
ENSATEP00000001232	vdac1	ENSATEP00000001232	ENSATEP00000017922	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	Voltage-dependent anion channel 1.	0.441
ENSATEP00000001245	ENSATEP00000012002	ENSATEP00000001245	ENSATEP00000012002	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	Aha1_N domain-containing protein.	0.906
ENSATEP00000001245	LOC113148625	ENSATEP00000001245	ENSATEP00000025670	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	AHA1, activator of heat shock protein ATPase homolog 1b.	0.906
ENSATEP00000001245	LOC113159920	ENSATEP00000001245	ENSATEP00000000491	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.	0.625
ENSATEP00000001245	LOC113168027	ENSATEP00000001245	ENSATEP00000030598	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	Prostaglandin E synthase 3a (cytosolic).	0.959
ENSATEP00000001245	hsp90ab1	ENSATEP00000001245	ENSATEP00000024904	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	Heat shock protein 90, alpha (cytosolic), class B member 1.	0.871
ENSATEP00000001245	ppid	ENSATEP00000001245	ENSATEP00000006871	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	Peptidylprolyl isomerase D.	0.966
ENSATEP00000001245	ptges3	ENSATEP00000001245	ENSATEP00000024030	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	Prostaglandin E synthase 3b (cytosolic).	0.959
ENSATEP00000001245	stip1	ENSATEP00000001245	ENSATEP00000011139	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	Stress-induced phosphoprotein 1.	0.989
ENSATEP00000001245	vdac1	ENSATEP00000001245	ENSATEP00000017922	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	Voltage-dependent anion channel 1.	0.441
ENSATEP00000012002	ENSATEP00000001232	ENSATEP00000012002	ENSATEP00000001232	Aha1_N domain-containing protein.	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1.	0.906
ENSATEP00000012002	ENSATEP00000001245	ENSATEP00000012002	ENSATEP00000001245	Aha1_N domain-containing protein.	Heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 2.	0.906