LOC113160472 protein (Anabas testudineus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

LOC113160472

Phosphoribosyl pyrophosphate synthetase 1B. (318 aa)

Predicted Functional Partners:

LOC113158790

0.967

LOC113162021

0.967

LOC113153600

0.967

ppat

0.942

RBKS

0.939

prps2

0.938

ENSATEP00000026494

0.936

pgm2

0.926

ENSATEP00000029764

0.926

umps

0.925

Your Current Organism:

Anabas testudineus

NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSATEP00000026494	ENSATEP00000029764	ENSATEP00000026494	ENSATEP00000029764	Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).	Phosphoglucomutase 2-like 1.	0.929
ENSATEP00000026494	LOC113153600	ENSATEP00000026494	ENSATEP00000023446	Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).	Phosphoribosyl pyrophosphate synthetase-associated protein 2.	0.759
ENSATEP00000026494	LOC113158790	ENSATEP00000026494	ENSATEP00000005831	Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).	Pribosyltran_N domain-containing protein.	0.759
ENSATEP00000026494	LOC113160472	ENSATEP00000026494	ENSATEP00000006903	Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).	Phosphoribosyl pyrophosphate synthetase 1B.	0.936
ENSATEP00000026494	LOC113162021	ENSATEP00000026494	ENSATEP00000005908	Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).	Phosphoribosyl pyrophosphate synthetase associated protein 1.	0.759
ENSATEP00000026494	RBKS	ENSATEP00000026494	ENSATEP00000015847	Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	0.958
ENSATEP00000026494	pgm2	ENSATEP00000026494	ENSATEP00000029116	Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).	Phosphoglucomutase 2.	0.929
ENSATEP00000026494	prps2	ENSATEP00000026494	ENSATEP00000026414	Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).	Pribosyltran_N domain-containing protein.	0.936
ENSATEP00000026494	umps	ENSATEP00000026494	ENSATEP00000006510	Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).	Uridine monophosphate synthetase.	0.487
ENSATEP00000029764	ENSATEP00000026494	ENSATEP00000029764	ENSATEP00000026494	Phosphoglucomutase 2-like 1.	Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).	0.929
ENSATEP00000029764	LOC113153600	ENSATEP00000029764	ENSATEP00000023446	Phosphoglucomutase 2-like 1.	Phosphoribosyl pyrophosphate synthetase-associated protein 2.	0.753
ENSATEP00000029764	LOC113158790	ENSATEP00000029764	ENSATEP00000005831	Phosphoglucomutase 2-like 1.	Pribosyltran_N domain-containing protein.	0.753
ENSATEP00000029764	LOC113160472	ENSATEP00000029764	ENSATEP00000006903	Phosphoglucomutase 2-like 1.	Phosphoribosyl pyrophosphate synthetase 1B.	0.926
ENSATEP00000029764	LOC113162021	ENSATEP00000029764	ENSATEP00000005908	Phosphoglucomutase 2-like 1.	Phosphoribosyl pyrophosphate synthetase associated protein 1.	0.753
ENSATEP00000029764	RBKS	ENSATEP00000029764	ENSATEP00000015847	Phosphoglucomutase 2-like 1.	Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.	0.927
ENSATEP00000029764	ppat	ENSATEP00000029764	ENSATEP00000022182	Phosphoglucomutase 2-like 1.	Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.	0.546
ENSATEP00000029764	prps2	ENSATEP00000029764	ENSATEP00000026414	Phosphoglucomutase 2-like 1.	Pribosyltran_N domain-containing protein.	0.926
LOC113153600	ENSATEP00000026494	ENSATEP00000023446	ENSATEP00000026494	Phosphoribosyl pyrophosphate synthetase-associated protein 2.	Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).	0.759
LOC113153600	ENSATEP00000029764	ENSATEP00000023446	ENSATEP00000029764	Phosphoribosyl pyrophosphate synthetase-associated protein 2.	Phosphoglucomutase 2-like 1.	0.753
LOC113153600	LOC113158790	ENSATEP00000023446	ENSATEP00000005831	Phosphoribosyl pyrophosphate synthetase-associated protein 2.	Pribosyltran_N domain-containing protein.	0.545