Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rftn1Uncharacterized protein. (658 aa)    
Predicted Functional Partners:
cfap298
Cilia and flagella associated protein 298.
      
 0.709
ncaph2
Non-SMC condensin II complex, subunit H2.
      
 0.702
romo1
Reactive oxygen species modulator 1.
      
 0.647
oxnad1
Oxidoreductase NAD-binding domain containing 1.
      
 0.641
ATG2B
Autophagy related 2B.
    
 
 0.632
ATG2A
Autophagy related 2A.
    
 
 0.632
LOC113170731
GMP_PDE_delta domain-containing protein.
    
   0.622
ENSATEP00000014018
Unc-119 homolog b (C. elegans).
    
   0.622
ENSATEP00000001285
Glyco_trans_2-like domain-containing protein; Belongs to the glycosyltransferase 2 family. GalNAc-T subfamily.
      
 0.562
dph3
Diphthamide biosynthesis 3.
      
 0.558
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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