Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rapgef2Rap guanine nucleotide exchange factor (GEF) 2. (1627 aa)    
Predicted Functional Partners:
rap1b
Uncharacterized protein.
    
 0.987
LOC113166982
RAP1A, member of RAS oncogene family a.
    
 0.987
LOC113154164
Uncharacterized protein.
    
 0.987
rapgef6
Rap guanine nucleotide exchange factor (GEF) 6.
   
  0.972
LOC113160544
RAP2C, member of RAS oncogene family.
    
 0.961
LOC113167294
Membrane associated guanylate kinase, WW and PDZ domain containing 1a.
    
 0.958
magi1
Membrane associated guanylate kinase, WW and PDZ domain containing 1b.
    
 0.958
mras
Muscle RAS oncogene homolog.
    
 0.955
LOC113172413
RAP2B, member of RAS oncogene family.
    
 0.952
RAP2A
RAP2A, member of RAS oncogene family.
    
 0.952
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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