Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccdc9bUncharacterized protein. (576 aa)    
Predicted Functional Partners:
chtop
Chromatin target of PRMT1a.
    
 
 0.838
vps18
VPS18 core subunit of CORVET and HOPS complexes.
      
 0.634
PES1
Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.528
wdr18
WD repeat domain 18.
   
 0.505
tex10
Testis expressed 10.
    
 0.494
znf276
Zinc finger protein 276.
    
 
 0.493
dctn5
Dynactin 5.
    
 0.462
tarbp1
Si:dkey-85a20.4.
      
 0.447
svep1
Sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1.
    
  0.446
LOC113155935
Myocardin related transcription factor Ab.
  
  
  0.446
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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