Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RNF2Ring finger protein 2. (342 aa)    
Predicted Functional Partners:
ENSATEP00000021761
Bmi1 polycomb ring finger oncogene 1a.
    
 0.978
pcgf2
Polycomb group ring finger 2.
    
0.975
PCGF3
Polycomb group ring finger 3.
    
 0.973
pcgf1
Polycomb group ring finger 1.
   
 0.972
pcgf5
Polycomb group ring finger 5a.
    
 0.971
cbx4
Chromobox 4.
    
 0.963
cbx8
Chromobox homolog 8b.
    
 0.963
LOC113155158
Chromobox homolog 4 (Pc class homolog, Drosophila).
    
 0.963
LOC113155165
Chromobox homolog 8a (Pc class homolog, Drosophila).
    
 0.963
LOC113156830
Chromo domain-containing protein.
    
 0.962
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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