Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccndbp1Cyclin D-type binding-protein 1. (344 aa)    
Predicted Functional Partners:
tfpt
TCF3 (E2A) fusion partner.
    
   0.922
ino80e
INO80 complex subunit E.
    
   0.898
ENSATEP00000034707
Ribosomal protein, large, P0.
   
   0.896
suox
Sulfite oxidase.
    
 0.858
syf2
SYF2 pre-mRNA-splicing factor.
    
 
 0.826
LOC113161898
Si:dkey-44g23.5.
    
   0.822
LOC113156866
Uncharacterized protein.
    
   0.822
nfrkb
Nuclear factor related to kappaB binding protein.
    
   0.809
ENSATEP00000015845
Epoxide hydrolase 2, cytoplasmic.
   
 0.759
tmem62
Transmembrane protein 62.
    
 
 0.733
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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