Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC113169460Hypoxia inducible factor 1 subunit alpha, like. (685 aa)    
Predicted Functional Partners:
vhl
Von Hippel-Lindau tumor suppressor.
    
 0.987
eloc
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.980
cul2
Cullin 2; Belongs to the cullin family.
    
 0.979
arnt2
Aryl-hydrocarbon receptor nuclear translocator 2.
   
 0.976
LOC113170866
Aryl hydrocarbon receptor nuclear translocator.
   
 0.976
ELOB
Elongin B.
    
 0.957
LOC113160260
Elongin B.
    
 0.957
hif1an
Hypoxia inducible factor 1 subunit alpha inhibitor.
    
 0.955
egln1
Egl-9 family hypoxia-inducible factor 1a.
    
 0.955
LOC113155852
E1A binding protein p300 a.
    
 0.952
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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