Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
tap1Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP). (737 aa)    
Predicted Functional Partners:
tapbp
TAP binding protein (tapasin), tandem duplicate 2.
   
 0.977
tapbpl
TAP binding protein like.
   
 
 0.935
pdia3
Protein disulfide-isomerase.
  
 0.935
LOC113152806
Calreticulin.
   
 0.920
LOC113152974
Calreticulin.
   
 0.920
LOC113172375
Calreticulin 3b.
   
 0.920
LOC113155201
Protein disulfide-isomerase.
  
  0.899
LOC113156263
Transporter associated with antigen processing, subunit type t, teleost specific.
     
 0.872
ENSATEP00000030150
Transporter associated with antigen processing, subunit type a.
     
  0.872
ENSATEP00000021332
Protein disulfide-isomerase A4; Belongs to the protein disulfide isomerase family.
  
 0.815
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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