Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mib2Mindbomb E3 ubiquitin protein ligase 2. (960 aa)    
Predicted Functional Partners:
mib1
Mindbomb E3 ubiquitin protein ligase 1.
    
 0.986
traf7
TNF receptor-associated factor 7.
    
 0.965
rps27a
Ubiquitin-like domain-containing protein.
   
 0.946
ENSATEP00000032876
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 0.943
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.930
LOC113162086
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.930
ENSATEP00000032550
WD_REPEATS_REGION domain-containing protein.
   
 0.930
ENSATEP00000032615
Uncharacterized protein.
   
 0.930
optn
Optineurin.
    
 0.929
LOC113167050
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
 0.929
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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