Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
vsig10Uncharacterized protein. (616 aa)    
Predicted Functional Partners:
lrrc73
Leucine rich repeat containing 73.
      
 0.764
ankrd13d
Ankyrin repeat domain 13 family, member D.
      
 0.741
tepsin
TEPSIN adaptor related protein complex 4 accessory protein.
      
 0.709
ttc17
Tetratricopeptide repeat domain 17.
      
 0.709
lyplal1
Lysophospholipase like 1.
      
 0.686
polr3d
Polymerase (RNA) III (DNA directed) polypeptide D.
      
 0.676
nprl2
NPR2 like, GATOR1 complex subunit.
      
 0.655
LOC113156070
Mitogen-activated protein kinase kinase 6.
    
  0.649
MAP2K6
Mitogen-activated protein kinase kinase 6.
    
  0.649
st3gal5
ST3 beta-galactoside alpha-2,3-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
      
 0.638
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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