Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
arhgef19Rho guanine nucleotide exchange factor (GEF) 19. (972 aa)    
Predicted Functional Partners:
ENSATEP00000006869
Uncharacterized protein.
    
 0.844
epha2
Eph receptor A2 b.
    
 0.765
LOC113154556
Eph receptor A2 a.
    
 0.765
LOC113151700
Cell division cycle 42.
    
 0.747
LOC113151700-2
Cell division control protein 42 homolog.
    
 0.747
CDC42
Cell division cycle 42.
    
 0.747
LOC113162060
Rac family small GTPase 2.
    
 0.711
RAC1
Rac family small GTPase 1.
    
 0.711
LOC113156741
Rac family small GTPase 3b.
    
 0.711
LOC113158536
Uncharacterized protein.
    
 0.711
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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