Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cramp1Cramped chromatin regulator homolog 1. (1184 aa)    
Predicted Functional Partners:
ss18l2
Ss18, like 2.
    
   0.930
ENSATEP00000003176
Nuclear protein, ataxia-telangiectasia locus.
    
 
 0.927
ENSATEP00000015608
Si:dkey-27c15.3.
   
 
 0.891
LOC113169062
Uncharacterized protein.
   
 
 0.891
sfi1
SFI1 centrin binding protein.
      
 0.830
PPP4R3C
Protein phosphatase 4 regulatory subunit 3C.
    
   0.815
crym
Crystallin, mu.
      
 0.789
ENSATEP00000019257
THAP-type domain-containing protein.
      
 0.726
jpt2
Jupiter microtubule associated homolog 2.
      
 0.710
ENSATEP00000014100
Nuclear receptor subfamily 0, group B, member 2b.
    
 
 0.707
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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