Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC113174633Mesoderm posterior ba. (257 aa)    
Predicted Functional Partners:
nkx2-5
NK2 homeobox 5.
    
 0.806
minar1
Membrane integral NOTCH2 associated receptor 1.
      
 0.656
ENSATEP00000034858
UPF0258 domain-containing protein.
      
 0.656
ENSATEP00000000666
GATA binding protein 5.
   
 0.600
gata6
GATA binding protein 6.
   
 0.600
gata4
GATA binding protein 4.
   
 0.600
tcf12
Transcription factor 12.
    
 0.592
TCF4
Transcription factor 4.
    
 0.592
LOC113171719
Transcription factor 3a.
    
 0.592
tcf3
Transcription factor 3b.
    
 0.592
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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