trit1 protein (Anabas testudineus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

trit1

tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family. (478 aa)

Predicted Functional Partners:

mthfr

0.911

idi1

0.905

ftsj1

0.903

ENSATEP00000014438

0.896

pdss2

0.860

trmt12

0.849

pdss1

0.848

gtpbp6

0.847

yrdc

0.833

ENSATEP00000004966

0.793

Your Current Organism:

Anabas testudineus

NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSATEP00000004966	gtpbp6	ENSATEP00000004966	ENSATEP00000018384	Mitochondrial rRNA methyltransferase 2.	GTP binding protein 6 (putative).	0.729
ENSATEP00000004966	trit1	ENSATEP00000004966	ENSATEP00000007733	Mitochondrial rRNA methyltransferase 2.	tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.	0.793
ENSATEP00000014438	trit1	ENSATEP00000014438	ENSATEP00000007733	FtsJ RNA 2'-O-methyltransferase 3.	tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.	0.896
ftsj1	trit1	ENSATEP00000012079	ENSATEP00000007733	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.	tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.	0.903
ftsj1	trmt12	ENSATEP00000012079	ENSATEP00000026428	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.	tRNA methyltransferase 12 homolog.	0.738
ftsj1	yrdc	ENSATEP00000012079	ENSATEP00000014466	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.	YrdC N(6)-threonylcarbamoyltransferase domain containing.	0.711
gtpbp6	ENSATEP00000004966	ENSATEP00000018384	ENSATEP00000004966	GTP binding protein 6 (putative).	Mitochondrial rRNA methyltransferase 2.	0.729
gtpbp6	trit1	ENSATEP00000018384	ENSATEP00000007733	GTP binding protein 6 (putative).	tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.	0.847
idi1	mthfr	ENSATEP00000032552	ENSATEP00000031789	Isopentenyl-diphosphate delta isomerase 1.	Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.	0.897
idi1	pdss1	ENSATEP00000032552	ENSATEP00000033798	Isopentenyl-diphosphate delta isomerase 1.	Prenyl (decaprenyl) diphosphate synthase, subunit 1; Belongs to the FPP/GGPP synthase family.	0.896
idi1	pdss2	ENSATEP00000032552	ENSATEP00000014957	Isopentenyl-diphosphate delta isomerase 1.	Prenyl (decaprenyl) diphosphate synthase, subunit 2; Belongs to the FPP/GGPP synthase family.	0.896
idi1	trit1	ENSATEP00000032552	ENSATEP00000007733	Isopentenyl-diphosphate delta isomerase 1.	tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.	0.905
mthfr	idi1	ENSATEP00000031789	ENSATEP00000032552	Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.	Isopentenyl-diphosphate delta isomerase 1.	0.897
mthfr	pdss1	ENSATEP00000031789	ENSATEP00000033798	Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.	Prenyl (decaprenyl) diphosphate synthase, subunit 1; Belongs to the FPP/GGPP synthase family.	0.891
mthfr	pdss2	ENSATEP00000031789	ENSATEP00000014957	Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.	Prenyl (decaprenyl) diphosphate synthase, subunit 2; Belongs to the FPP/GGPP synthase family.	0.891
mthfr	trit1	ENSATEP00000031789	ENSATEP00000007733	Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.	tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.	0.911
pdss1	idi1	ENSATEP00000033798	ENSATEP00000032552	Prenyl (decaprenyl) diphosphate synthase, subunit 1; Belongs to the FPP/GGPP synthase family.	Isopentenyl-diphosphate delta isomerase 1.	0.896
pdss1	mthfr	ENSATEP00000033798	ENSATEP00000031789	Prenyl (decaprenyl) diphosphate synthase, subunit 1; Belongs to the FPP/GGPP synthase family.	Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.	0.891
pdss1	pdss2	ENSATEP00000033798	ENSATEP00000014957	Prenyl (decaprenyl) diphosphate synthase, subunit 1; Belongs to the FPP/GGPP synthase family.	Prenyl (decaprenyl) diphosphate synthase, subunit 2; Belongs to the FPP/GGPP synthase family.	0.996
pdss1	trit1	ENSATEP00000033798	ENSATEP00000007733	Prenyl (decaprenyl) diphosphate synthase, subunit 1; Belongs to the FPP/GGPP synthase family.	tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37; Belongs to the IPP transferase family.	0.848

page 1 of 2

Server load: medium (56%) [HD]

Permalink

Network

Neighborhood

Experiments

Co-occurrence

Databases

Co-expression

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About