STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSATEP00000007753Si:dkey-71h2.2. (252 aa)    
Predicted Functional Partners:
ENSATEP00000005505
Uncharacterized protein.
    
  0.986
ENSATEP00000005580
Uncharacterized protein.
    
  0.986
LOC113174105
Intersectin 2b.
    
  0.986
LOC113161913
Low density lipoprotein receptor b.
    
  0.871
ENSATEP00000016430
Low density lipoprotein receptor a.
    
  0.871
LOC113153133
Low density lipoprotein receptor adaptor protein 1a.
  
  
 
0.839
ldlrap1
Low density lipoprotein receptor adaptor protein 1b.
  
  
 
0.838
ENSATEP00000001310
Uncharacterized protein.
    
  0.784
vldlr
Very low density lipoprotein receptor.
    
  0.784
LOC113152075
Low density lipoprotein receptor-related protein 8, apolipoprotein e receptor.
    
  0.784
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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