Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
txnl4aThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)    
Predicted Functional Partners:
prpf6
PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).
    
 0.999
ENSATEP00000014599
Pre-mRNA processing factor 8.
    
 0.999
eftud2
Elongation factor Tu GTP binding domain containing 2.
    
 0.998
ddx23
DEAD (Asp-Glu-Ala-Asp) box polypeptide 23.
    
 0.998
snrnp40
Small nuclear ribonucleoprotein 40 (U5).
    
 0.997
pqbp1
Polyglutamine binding protein 1.
   
 0.992
cd2bp2
CD2 (cytoplasmic tail) binding protein 2.
   
 0.991
snrnp200
Small nuclear ribonucleoprotein 200 (U5).
    
 0.987
zmat2
Zinc finger, matrin-type 2.
   
 0.984
snrpg
Small nuclear ribonucleoprotein G.
   
 0.984
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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