STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dhx16DEAH (Asp-Glu-Ala-His) box polypeptide 16. (1050 aa)    
Predicted Functional Partners:
gpkow
G patch domain and KOW motifs.
    
 0.996
cdc5l
CDC5 cell division cycle 5-like (S. pombe).
   
 0.995
snrnp200
Small nuclear ribonucleoprotein 200 (U5).
  
 
 0.995
ENSATEP00000014599
Pre-mRNA processing factor 8.
   
 
 0.994
xab2
XPA binding protein 2.
   
 0.994
ENSATEP00000016279
Cell division cycle 40 homolog (S. cerevisiae).
   
 0.991
rnf113a
Ring finger protein 113A.
    
 0.989
cwc22
CWC22 spliceosome associated protein homolog.
   
 0.985
cwc27
CWC27 spliceosome associated cyclophilin.
  
 0.985
ENSATEP00000030753
Splicing factor 3a, subunit 1.
   
 0.981
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.