STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdzrn3PDZ domain containing RING finger 3b. (1047 aa)    
Predicted Functional Partners:
mib2
Mindbomb E3 ubiquitin protein ligase 2.
    
 0.890
ENSATEP00000007932
Baculoviral IAP repeat containing 6.
   
 0.879
ENSATEP00000007963
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.879
rps27a
Ubiquitin-like domain-containing protein.
    
 0.823
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.797
LOC113165259
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.772
ripk4
Receptor-interacting serine-threonine kinase 4.
   
 0.772
LOC113167298
Transmembrane protein 189.
   
 0.763
LOC113167299
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.763
tradd
Tnfrsf1a-associated via death domain.
    
 0.758
Your Current Organism:
Anabas testudineus
NCBI taxonomy Id: 64144
Other names: A. testudineus, Amphiprion testudineus, Anthias testudineus, Antias testudineus, climbing perch
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.